DNA Polymerase IV (Family Y)
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-235
PRO-236
10.5
9.5
-20.7
-35.0
108.0
123.8
-148.0
GLU-235
PRO-236
14.7
15.8
-20.7
-35.0
49.5
33.7
30.9
PRO-236
ILE-237
11.8
13.3
19.0
5.2
82.2
81.4
0.1
GLU-235
PRO-236
10.5
9.5
-20.7
-35.0
108.0
123.8
-148.0
GLU-235
PRO-236
14.7
15.8
-20.7
-35.0
49.5
33.7
30.9
PRO-236
ILE-237
11.8
13.3
19.0
5.2
82.2
81.4
0.1
ILE-237
ARG-238
8.8
9.7
-3.3
42.4
94.3
98.6
10.0
ARG-238
THR-239
5.7
7.6
2.8
22.0
35.0
73.0
10.2
THR-239
ARG-240
3.0
4.0
5.6
50.1
42.1
13.4
42.1
ARG-240
VAL-241
3.4
3.2
65.2
151.7
39.2
60.3
-80.1
VAL-241
ARG-242
1.7
1.2
73.2
69.6
24.0
30.0
99.7
ARG-242
LYS-243
1.9
1.3
14.7
-21.5
48.0
39.7
-3.4
LYS-243
SER-244
1.8
1.0
-15.1
9.4
146.1
148.8
-3.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees