Fab Fragment Of 8F5 Antibody Against Human Rhinovirus 3 Serotype 2 4

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-117   SER-118  4.1 4.6 -18.1 12.1 24.3 17.3 4.8
 SER-118   ALA-119  2.9 4.8 -12.8 10.2 95.2 86.4 4.8
 ALA-119   LYS-120  2.1 3.6 -22.8 -10.0 72.1 57.4 52.4
 LYS-120   THR-121  3.8 3.6 -20.5 41.1 145.0 123.1 18.9
 THR-121   THR-122  6.1 5.8 -20.7 8.9 92.3 88.4 2.6

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees