Virb11 Homolog

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  ILE-132   ARG-133  35.7 35.6 -4.1 -3.8 98.5 98.9 -2.9  ARG-133   ILE-134  32.3 32.1 7.9 -14.2 87.6 92.8 -13.3  ILE-134   PRO-135  29.4 29.2 16.1 -13.7 116.5 111.2 -9.0  PRO-135   SER-136  26.5 26.0 -32.0 15.9 125.0 128.9 -79.0  SER-136   LYS-137  22.8 22.6 72.2 -64.5 89.1 101.8 -79.4  LYS-137   THR-138  22.4 20.1 -32.8 38.8 121.9 127.5 7.1  THR-138   THR-139  18.9 17.6 -20.5 11.5 60.8 72.6 44.2  THR-139   TYR-140  15.4 14.6 18.3 17.6 47.2 37.5 202.5  TYR-140   PRO-141  13.0 13.1 -11.9 4.6 57.8 68.5 5.4  PRO-141   HIS-142  9.5 9.4 -8.7 -3.0 94.6 95.6 -19.0 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  SER-203   ILE-204  18.4 18.2 21.0 -27.4 73.4 69.2 -18.5  ILE-204   GLU-205  22.0 21.9 -5.8 -8.0 30.7 38.3 99.9  GLU-205   ASP-206  24.2 24.3 1.6 -2.0 81.4 77.7 39.3  ASP-206   THR-207  27.8 27.9 27.7 -7.9 126.4 138.4 -117.7  THR-207   GLU-208  27.3 27.2 -10.4 -5.5 82.4 77.9 -11.0 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees