Pyruvate Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-91   GLY-92  8.0 8.3 1.1 0.3 129.3 129.7 -8.0
 GLY-96   GLY-97  22.8 21.5 48.2 169.3 51.6 64.5 1224.2
 GLY-97   ASP-98  20.0 21.3 -166.3 2.9 130.5 111.2 -401.4
 ASP-98   ALA-99  18.5 19.2 -41.7 42.3 84.8 82.9 -12.2
 ALA-99   VAL-100  18.0 18.8 36.0 -32.0 21.0 28.3 37.6
 VAL-100   MET-101  19.0 18.6 4.2 14.7 93.0 100.2 -21.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-175   GLY-176  8.9 9.1 11.8 -2.2 77.5 87.0 -95.5
 GLY-176   VAL-177  5.7 5.8 -2.8 -0.7 84.8 76.2 25.8
 VAL-177   ASN-178  2.7 2.9 2.7 -3.0 100.1 102.2 -10.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-182   ASP-183  9.7 9.9 -0.1 -7.0 63.8 71.4 11.7
 ASP-183   VAL-184  10.6 10.9 4.7 3.6 135.3 139.7 -36.9
 VAL-184   ASP-185  7.5 8.0 -25.4 26.6 55.1 51.3 -13.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-186   PRO-187  8.1 7.4 -8.9 -1.9 93.9 79.1 -7.4
 PRO-187   ALA-188  11.1 10.6 9.3 -14.5 136.1 135.7 18.2
 ALA-188   VAL-189  13.9 12.3 17.8 0.2 81.9 63.3 100.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees