Metabotropic Glutamate Receptor Subtype 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-207   ASP-208  2.3 2.9 -0.2 -2.9 92.7 92.5 -3.7
 ASP-208   THR-209  2.5 2.5 -25.7 4.0 71.4 71.8 33.9
 THR-209   LEU-210  5.5 5.6 -7.6 23.0 142.2 149.8 51.1
 LEU-210   GLN-211  6.4 6.5 25.3 -29.6 78.7 67.9 -3.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-342   GLN-343  3.3 3.7 8.0 -12.3 166.5 156.6 22.9
 GLN-343   SER-344  1.9 1.4 -14.2 -15.6 78.0 81.1 58.5
 SER-344   PRO-345  3.4 3.1 -1.5 -15.3 24.9 42.7 76.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-473   ASP-474  11.8 11.9 -6.2 5.5 121.1 122.7 1.1
 ASP-474   ALA-475  8.7 8.7 22.6 -5.7 18.0 15.8 75.1
 ALA-475   PRO-476  8.3 8.1 10.5 -1.3 71.1 76.0 25.8
 PRO-476   GLY-477  7.4 7.9 -15.3 72.5 113.4 102.5 55.0
 GLY-477   ARG-478  4.1 5.4 -64.2 42.5 98.1 147.2 -80.0
 ARG-478   TYR-479  4.1 4.7 -64.4 17.5 96.1 88.9 8.6
 TYR-479   ASP-480  4.9 5.0 12.6 -16.7 40.1 36.6 1.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees