Helicase Pcra
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-19
VAL-20
5.2
4.9
-0.6
3.6
125.7
125.2
119.7
VAL-20
ARG-21
4.3
4.3
-5.9
11.2
164.9
161.3
36.1
ARG-21
THR-22
4.8
5.0
-18.4
7.1
98.5
99.4
-44.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-25
PRO-26
8.4
8.3
2.5
11.3
8.1
8.8
226.6
PRO-26
LEU-27
9.3
9.1
23.8
-25.4
68.3
72.5
-11.6
LEU-27
LEU-28
6.9
6.8
7.2
-3.3
7.9
11.6
70.8
LEU-28
ILE-29
7.3
7.0
1.2
1.5
73.6
72.4
-29.9
ILE-29
MET-30
5.2
4.7
-7.6
-2.1
172.5
171.0
-123.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-31
GLY-32
4.5
4.9
29.0
-13.9
13.0
13.0
254.8
GLY-32
ALA-33
6.5
6.8
20.6
-21.9
68.0
68.8
-19.4
ALA-33
GLY-34
5.7
6.0
2.0
1.9
108.0
107.5
-102.1
GLY-34
SER-35
8.1
8.5
0.7
10.5
154.2
150.4
-195.8
SER-35
GLY-36
8.4
8.6
-28.3
18.9
37.6
40.5
138.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-250
ASP-251
3.3
2.8
12.6
-8.2
63.5
65.5
-26.4
ASP-251
ALA-252
4.4
4.2
4.8
-7.1
51.1
54.1
22.7
ALA-252
ASP-253
7.6
7.3
-7.6
10.7
165.6
165.4
53.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-268
SER-269
13.3
12.8
-6.5
10.2
136.3
134.3
119.0
SER-269
PHE-270
15.7
15.3
13.3
-19.6
29.5
34.3
-79.6
PHE-270
GLU-271
13.3
13.0
6.3
-14.6
38.2
34.9
-84.7
GLU-271
ARG-272
15.0
14.7
33.4
-26.8
103.7
94.7
-17.0
GLU-271
ARG-272
15.0
14.7
33.4
-26.8
103.7
94.7
-17.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-271
ARG-272
15.0
14.7
33.4
-26.8
103.7
94.7
-17.0
GLU-271
ARG-272
15.0
14.7
33.4
-26.8
103.7
94.7
-17.0
ARG-272
ASP-273
18.2
17.9
13.6
-19.4
119.6
118.5
-6.8
ASP-273
TYR-274
17.1
17.0
12.7
-16.9
162.9
161.9
39.4
TYR-274
PRO-275
15.3
15.3
7.8
-24.1
108.6
97.5
184.0
PRO-275
ASN-276
17.6
17.2
20.3
8.1
120.3
126.8
-274.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-277
LYS-278
12.5
12.0
-10.5
13.7
89.4
88.4
-14.4
LYS-278
VAL-279
11.0
10.4
11.5
-14.8
149.9
154.2
48.9
VAL-279
ILE-280
10.4
10.1
-12.0
6.7
87.4
86.6
-13.7
ILE-280
LEU-281
9.1
9.0
9.4
-7.7
164.4
165.8
-50.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-378
GLN-379
18.7
18.6
9.8
-7.7
59.1
58.4
139.0
GLN-379
ILE-380
18.2
17.6
17.4
-3.7
91.2
86.2
112.9
ILE-380
VAL-381
15.6
15.1
4.3
3.9
31.4
19.6
119.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees