Serum Albumin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-497   VAL-498  6.4 7.4 3.5 8.8 89.8 102.6 -20.6
 VAL-498   PRO-499  9.2 9.7 21.1 18.1 37.6 43.9 275.6
 PRO-499   LYS-500  8.6 9.2 -19.4 41.2 127.2 141.6 236.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-516   SER-517  13.9 13.7 -3.3 1.7 111.9 108.2 68.7
 SER-517   GLU-518  15.5 15.3 -2.9 16.1 166.2 168.4 162.1
 GLU-518   LYS-519  17.1 17.0 -21.2 11.0 124.6 123.7 -138.4
 LYS-519   GLU-520  14.6 14.3 -10.0 10.5 98.4 97.8 -7.1
 GLU-520   ARG-521  11.4 11.2 22.1 -16.7 54.9 56.3 51.6
 ARG-521   GLN-522  13.5 13.5 -21.5 11.2 166.4 165.0 -121.8
 GLN-522   ILE-523  13.3 13.4 -5.2 9.6 105.4 100.8 20.3
 ILE-523   LYS-524  9.6 9.7 4.8 -4.4 82.4 81.5 20.4
 LYS-524   LYS-525  9.7 9.9 -2.2 1.6 159.7 163.1 -11.8
 LYS-525   GLN-526  11.8 11.6 -4.3 14.3 136.4 124.6 69.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-531   LEU-532  6.1 6.4 -11.5 6.9 36.5 33.0 36.5
 LEU-532   VAL-533  8.6 8.7 -8.8 4.2 38.9 41.1 59.9
 VAL-533   LYS-534  5.8 5.9 13.8 -10.2 91.9 94.3 -26.6
 LYS-534   HIS-535  4.7 5.0 -33.1 43.2 70.8 65.0 -47.8
 HIS-535   LYS-536  8.2 8.6 1.5 3.3 160.8 164.2 -26.1
 LYS-536   PRO-537  8.4 8.3 -11.3 39.1 72.8 69.7 -116.3
 PRO-537   LYS-538  5.0 4.6 -7.5 -27.9 16.6 35.1 329.4
 LYS-538   ALA-539  5.9 5.8 38.2 78.5 109.3 86.3 -170.7
 ALA-539   THR-540  8.7 8.7 69.2 15.7 36.5 102.4 484.1
 THR-540   LYS-541  9.6 9.9 67.7 34.7 108.4 45.0 -694.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees