DNA Polymerase IV (Family Y)
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-166
ASP-167
0.7
1.1
-3.1
3.9
84.2
84.6
47.8
ASP-167
ASP-168
3.1
3.3
-16.1
11.2
97.1
96.8
22.8
ASP-168
GLU-169
6.1
6.0
5.0
5.6
125.0
125.5
-62.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-228
ALA-229
10.6
10.6
-3.4
16.6
151.8
148.8
176.9
ALA-229
ARG-230
13.2
13.5
-17.1
4.7
114.7
115.1
-150.2
ARG-230
ASP-231
14.6
14.6
3.2
-11.5
75.5
73.9
53.7
ASP-231
GLU-232
11.3
11.2
16.7
-2.5
125.6
122.4
-87.0
GLU-232
TYR-233
12.6
12.2
-11.6
2.5
33.3
36.7
98.5
TYR-233
ASN-234
9.7
9.3
14.8
-20.0
104.7
90.4
61.2
ASN-234
GLU-235
9.9
9.1
-66.4
72.4
23.3
25.1
-46.7
GLU-235
PRO-236
7.5
7.3
13.6
4.5
85.4
90.5
-28.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees