Atp-Dependent RNA Helicase Dob1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-614
ILE-615
23.9
24.3
-42.5
-24.8
122.8
132.0
-190.0
ASN-619
GLU-620
17.5
17.9
19.2
28.4
126.9
124.4
-136.1
GLU-620
GLU-621
14.6
15.0
-36.5
-1.6
85.9
88.5
-63.7
GLU-621
SER-622
11.0
12.1
26.2
-7.8
39.1
68.5
34.8
SER-622
VAL-623
10.3
9.4
17.3
-2.4
30.6
21.4
24.0
VAL-623
VAL-624
10.7
9.9
16.9
3.9
83.0
87.5
56.1
VAL-624
ILE-625
8.2
8.3
1.0
-8.1
81.7
80.9
48.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLN-795
LYS-796
11.2
11.8
-1.4
5.2
143.6
126.8
50.5
LYS-796
VAL-797
9.0
9.2
-3.0
7.6
68.0
61.8
70.2
VAL-797
GLU-798
6.2
6.6
-6.9
-0.8
65.9
84.6
20.8
GLU-798
ALA-799
6.5
8.3
-1.2
-1.3
137.0
149.0
-63.9
LYS-825
ALA-826
18.7
17.0
88.7
25.6
49.0
82.2
237.1
ALA-826
GLN-827
16.1
15.0
-41.7
-1.1
78.0
78.8
-7.4
GLN-827
ILE-828
18.4
18.1
-5.3
-3.7
144.9
138.2
-115.9
ILE-828
ALA-829
20.4
20.3
0.9
-0.7
40.3
43.7
34.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees