Type IIe Restriction Endonuclease Naei
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-175
HIS-176
5.2
4.8
-1.6
5.3
158.4
158.7
7.9
HIS-176
ILE-177
5.2
4.9
-32.6
45.4
125.8
131.5
28.8
ILE-177
PRO-178
1.9
1.7
-7.0
14.2
112.7
121.5
0.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-225
ASP-226
7.5
9.5
69.3
-115.7
88.1
118.3
42.9
ASP-226
PHE-227
10.4
10.5
17.7
-16.4
163.2
176.6
-10.1
PHE-227
MET-228
9.6
9.3
36.1
-11.9
104.5
114.6
-33.3
MET-228
LYS-229
12.4
11.0
11.5
-14.1
81.8
98.6
8.5
LYS-229
ARG-230
14.7
14.4
-6.0
35.2
36.1
29.1
-100.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees