Tryptophan Synthase Beta Chain 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-27   ARG-28  5.9 5.6 -4.9 5.0 89.4 82.0 -43.1
 ARG-28   PHE-29  7.7 7.3 -17.7 -8.4 28.5 38.0 151.5
 PHE-29   LYS-30  8.1 8.1 14.2 16.5 100.5 102.1 11.0
 LYS-30   ASP-31  9.5 8.9 -25.8 -8.9 111.7 85.5 17.1
 ASP-31   ASP-32  12.2 12.5 7.1 26.6 114.6 103.6 -92.7
 ASP-32   GLU-33  12.8 12.9 19.4 -5.2 143.8 140.3 -103.9
 GLU-33   GLU-34  15.8 16.1 -8.6 -3.6 29.2 28.4 101.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-88   GLN-89  5.9 5.9 -2.9 -0.2 115.6 115.7 -17.5
 GLN-89   ALA-90  2.9 2.9 5.9 -6.0 115.7 116.3 13.2
 ALA-90   LEU-91  0.6 0.8 1.3 -2.0 73.5 74.3 -13.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-116   ALA-117  2.7 2.7 -2.1 -4.8 49.7 51.9 8.8
 ALA-117   GLY-118  1.8 1.7 0.9 -0.7 96.6 98.0 -5.3
 GLY-118   ALA-119  2.1 2.1 -0.5 3.6 136.9 138.7 22.6
 ALA-119   LEU-120  2.6 2.7 7.4 -6.1 99.2 94.3 3.3
 LEU-120   LEU-121  4.0 4.0 -6.6 8.1 50.0 53.1 8.1
 LEU-121   GLY-122  5.2 5.5 12.4 -6.0 89.7 87.4 -8.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-180   TYR-181  6.4 5.9 11.2 -14.4 66.2 66.5 2.7
 TYR-181   LEU-182  8.1 7.7 15.5 -13.1 82.8 83.4 58.5
 LEU-182   ILE-183  6.6 6.6 8.9 -4.0 84.8 89.1 57.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees