D-Maltodextrin-Binding Protein 3

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-107   ILE-108  8.8 8.9 -1.8 2.2 152.5 150.9 -3.3
 ILE-108   ALA-109  9.1 9.0 -7.4 23.1 133.3 133.5 18.4
 ALA-109   VAL-110  5.8 5.7 9.1 -20.7 115.3 117.0 16.6
 VAL-110   GLU-111  2.1 2.1 12.8 -27.6 60.9 65.8 -4.0
 GLU-111   ALA-112  2.9 1.9 -0.2 -14.1 81.6 67.6 24.6
 ALA-112   LEU-113  4.8 4.9 14.7 5.3 55.4 47.7 28.6
 LEU-113   SER-114  8.4 8.3 8.8 -5.8 40.8 45.3 8.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-255   LYS-256  15.2 15.1 8.8 1.1 67.3 65.5 10.2
 LYS-256   PRO-257  12.5 12.3 -2.1 -5.5 111.6 104.5 -1.1
 PRO-257   PHE-258  9.7 9.6 2.6 4.9 44.5 52.4 29.1
 PHE-258   VAL-259  7.4 6.9 17.9 -14.9 123.5 125.9 3.5
 VAL-259   GLY-260  4.0 3.5 0.9 -2.8 55.9 61.6 6.7
 GLY-260   VAL-261  2.6 1.7 -16.4 -4.5 66.5 65.3 41.6
 VAL-261   LEU-262  3.1 3.0 0.4 -2.4 82.3 79.0 16.8
 LEU-262   SER-263  6.7 6.5 3.8 -5.4 63.8 70.9 -4.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-311   ALA-312  6.0 5.9 3.8 -16.0 81.2 78.4 -21.1
 ALA-312   LYS-313  5.3 5.1 19.0 5.5 32.8 17.8 62.5
 LYS-313   ASP-314  4.8 4.9 12.3 -17.3 78.6 82.3 30.6
 ASP-314   PRO-315  1.2 1.2 -6.4 3.3 67.7 58.3 7.3
 PRO-315   ARG-316  2.9 4.0 0.6 -3.2 142.8 144.4 8.9
 ARG-316   ILE-317  3.4 3.7 -0.3 -1.8 36.0 37.9 -6.7
 ILE-317   ALA-318  0.6 1.0 -1.0 4.7 78.3 74.9 12.5
 ALA-318   ALA-319  4.3 4.7 -1.6 6.0 61.8 53.9 -10.0
 ALA-319   THR-320  6.0 6.1 -10.7 2.8 14.4 18.7 12.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-325   LYS-326  9.2 9.0 11.8 -13.6 63.0 67.0 -16.5
 LYS-326   GLY-327  11.5 11.3 12.3 5.6 31.4 39.3 41.9
 GLY-327   GLU-328  9.5 9.3 5.3 17.3 40.4 21.9 62.5
 GLU-328   ILE-329  8.1 8.4 -21.1 10.1 102.1 100.0 -18.7
 ILE-329   MET-330  4.7 5.0 3.1 0.5 30.7 46.0 -12.8
 MET-330   PRO-331  3.9 3.8 -20.4 6.3 140.8 150.5 -10.1
 PRO-331   ASN-332  3.1 3.5 -25.3 16.2 97.3 106.6 28.1
 ASN-332   ILE-333  0.8 0.4 5.9 -32.7 12.0 11.0 -67.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees