DNA Polymerase III Subunit Gamma
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-6
ALA-7
15.2
15.3
5.2
0.5
9.7
19.5
50.6
ALA-7
ARG-8
15.7
15.8
-6.3
13.4
109.2
101.5
23.2
ARG-8
LYS-9
19.2
19.4
4.9
-3.8
105.6
118.8
-0.8
LYS-9
TRP-10
19.0
19.0
-10.6
3.4
121.0
113.1
-28.6
TRP-10
ARG-11
16.5
16.4
-2.6
6.8
171.5
173.5
44.2
ARG-11
PRO-12
18.1
17.8
-1.8
2.1
108.7
99.8
1.6
PRO-12
GLN-13
18.2
17.8
-3.2
-0.5
97.0
96.5
61.8
GLN-13
THR-14
21.8
21.4
2.0
5.6
42.9
59.1
43.0
THR-14
PHE-15
21.6
21.2
1.2
-10.5
63.6
58.1
-35.2
PHE-15
ALA-16
19.4
19.1
5.3
-9.8
125.4
124.4
40.0
ALA-16
ASP-17
19.1
18.3
15.5
-9.6
129.8
125.3
-36.8
ASP-17
VAL-18
17.1
16.5
-2.0
-0.1
114.7
121.6
-23.1
VAL-18
VAL-19
14.5
14.3
-4.9
4.1
87.9
87.4
5.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-175
LYS-176
9.1
8.9
7.2
11.1
78.0
81.3
24.0
LYS-176
ALA-177
5.6
5.4
-2.9
6.5
162.3
150.7
19.8
ALA-177
LEU-178
4.5
4.6
-7.2
12.2
118.9
127.3
64.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees