D-Glyceraldehyde-3-Phosphate-Dehydrogenase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-39
MET-40
16.3
16.3
-4.6
2.9
129.2
131.4
-133.1
MET-40
VAL-41
12.9
12.9
-2.3
4.7
89.5
87.4
112.6
VAL-41
TYR-42
12.0
12.1
0.9
-1.6
51.8
52.1
-118.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-55
GLU-56
11.7
11.7
-7.8
9.1
136.0
138.6
-25.0
GLU-56
VAL-57
10.8
10.9
-6.4
1.4
84.7
84.3
-39.5
VAL-57
LYS-58
9.5
9.6
8.6
-11.5
33.6
33.2
-137.4
LYS-58
ALA-59
9.6
9.7
0.8
0.9
76.9
74.9
167.3
ALA-59
GLU-60
9.1
9.0
6.7
-13.6
26.9
28.5
-165.1
GLU-60
ASP-61
6.7
6.6
0.1
10.8
74.8
77.8
124.9
ASP-61
GLY-62
6.9
6.3
-7.3
-5.8
49.4
52.1
358.5
GLY-62
ALA-63
9.2
9.0
6.3
-3.2
147.5
150.2
-35.4
ALA-63
LEU-64
6.4
6.5
1.0
9.4
117.1
117.7
-224.3
LEU-64
VAL-65
6.3
6.3
15.0
-14.5
90.9
89.0
-71.8
VAL-65
VAL-66
4.3
4.4
-0.4
-0.1
44.2
46.2
-24.2
VAL-66
ASP-67
5.2
5.3
1.8
-0.2
88.6
87.5
58.5
ASP-67
GLY-68
7.1
7.2
-3.9
1.4
127.6
125.1
100.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-145
ASN-146
13.6
13.7
-0.2
0.7
114.7
114.0
109.2
ASN-146
ALA-147
10.0
10.0
-1.2
1.0
139.5
138.1
-90.5
ALA-147
SER-148
11.2
11.4
-2.3
2.5
76.4
79.8
62.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLN-319
ARG-320
0.6
0.8
0.7
0.2
114.1
114.3
-64.5
ARG-320
VAL-321
2.6
2.6
4.1
0.6
53.7
53.2
39.9
VAL-321
ILE-322
5.1
5.0
0.5
-0.3
56.2
56.1
-71.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees