Nicotinamide Phosphoribosyltransferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-40   GLU-41  6.7 6.7 -3.1 -23.8 108.3 106.3 14.6
 TYR-54   GLU-55  9.4 9.5 16.0 2.7 162.8 157.2 -409.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-56   THR-57  7.8 7.9 -40.5 28.5 62.1 57.8 234.0
 THR-57   VAL-58  4.2 4.3 19.1 -9.9 102.0 95.8 -16.6
 VAL-58   PHE-59  4.4 4.5 6.1 -1.9 72.1 72.6 120.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-122   SER-123  9.1 9.3 -7.6 -3.0 53.6 54.4 145.4
 SER-123   VAL-124  8.8 9.2 2.9 -2.1 81.6 83.4 -15.5
 VAL-124   ILE-125  8.1 8.3 -1.9 5.1 23.1 22.4 46.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-126   ARG-127  7.5 7.7 6.4 -0.5 70.4 68.5 53.9
 ARG-127   GLY-128  5.9 6.0 3.0 1.2 8.8 7.7 72.5
 GLY-128   ASN-129  5.2 5.2 -4.1 2.8 120.6 118.9 7.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-160   VAL-161  2.8 2.6 -4.9 1.5 158.0 156.8 8.1
 VAL-161   ALA-162  1.6 1.6 1.0 -0.4 90.4 90.3 7.6
 ALA-162   THR-163  2.1 2.2 -6.7 7.2 70.7 72.4 -14.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-207   ALA-208  6.0 5.8 -8.8 4.0 53.1 54.3 -40.0
 ALA-208   SER-209  6.0 5.7 8.6 -11.6 60.6 63.1 -48.9
 SER-209   ALA-210  8.0 7.8 2.9 3.5 53.0 51.0 138.0
 ALA-210   HIS-211  5.0 4.9 0.8 -6.4 119.4 119.3 -118.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-216   GLY-217  9.5 9.5 5.4 -0.2 136.7 144.8 -3.9
 GLY-217   THR-218  6.7 6.9 0.0 -3.0 78.4 79.9 3.3
 THR-218   ASP-219  5.3 5.2 10.6 -29.1 141.3 140.1 293.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-225   LEU-226  15.8 15.5 -13.1 5.3 8.6 1.0 154.0
 LEU-226   ILE-227  14.5 14.5 -5.3 -0.3 61.7 64.9 14.7
 ILE-227   LYS-228  14.1 13.9 6.4 4.8 93.8 86.9 -25.7
 LYS-228   LYS-229  17.8 17.4 -5.2 -2.9 54.2 50.1 73.3
 LYS-229   TYR-230  19.2 18.9 0.2 4.1 167.5 168.9 -40.3
 TYR-230   TYR-231  17.2 17.1 -2.6 2.1 114.5 110.7 -21.0
 TYR-230   TYR-231  17.2 17.1 -2.6 2.1 114.5 110.7 -21.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-230   TYR-231  17.2 17.1 -2.6 2.1 114.5 110.7 -21.0
 TYR-230   TYR-231  17.2 17.1 -2.6 2.1 114.5 110.7 -21.0
 TYR-231   GLY-232  16.4 16.2 0.6 -5.9 111.1 115.8 125.7
 GLY-232   THR-233  18.7 18.1 10.5 -11.0 101.5 95.6 7.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-240   SER-241  10.5 10.6 5.0 3.7 63.5 58.3 525.5
 SER-241   VAL-242  8.0 8.3 3.3 -12.5 22.9 24.1 -151.0
 VAL-242   PRO-243  7.8 8.0 -2.1 -8.4 127.6 128.6 -6.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-382   GLY-383  4.7 4.6 -15.7 4.4 98.3 100.0 -80.1
 GLY-383   GLY-384  5.4 5.0 6.0 -2.7 37.7 39.2 71.8
 GLY-384   ALA-385  8.6 8.2 4.2 -3.0 33.8 41.4 56.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees