Cadherin-23

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-107   PRO-108  2.2 1.9 0.3 -1.9 98.7 97.6 -1.6
 PRO-108   THR-109  1.7 1.9 -1.9 0.3 14.5 13.4 -4.9
 THR-109   PHE-110  3.7 3.8 -1.9 -4.7 94.4 91.5 35.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-134   THR-135  7.5 7.6 -7.7 10.3 49.5 51.3 -12.3
 THR-135   ASP-136  6.5 6.9 -9.0 10.0 95.2 86.6 51.9
 ASP-136   PRO-137  4.3 4.5 -10.6 0.8 64.2 66.6 48.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-140   ALA-141  5.4 5.5 -6.1 -2.3 71.6 70.1 15.5
 ALA-141   GLY-142  1.7 1.8 0.2 -3.9 164.7 164.0 44.0
 GLY-142   GLY-143  3.0 2.9 0.8 4.0 129.5 129.4 -40.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees