Probable Butyrate Kinase 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-130   VAL-131  3.2 3.3 14.0 -20.2 17.0 17.7 -131.6
 VAL-131   VAL-132  2.7 2.7 7.4 -4.4 73.2 72.2 70.8
 VAL-132   ASP-133  1.1 1.2 -2.6 4.4 125.5 124.9 54.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-334   GLU-335  1.0 1.5 -12.3 16.9 105.6 109.4 152.4
 GLU-335   LYS-336  3.6 3.8 -19.8 20.9 94.6 90.8 59.8
 LYS-336   ALA-337  3.9 4.1 -15.0 10.3 24.7 24.6 18.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-365   TYR-366  6.7 5.8 4.5 -9.7 84.8 84.6 54.1
 TYR-366   ASP-367  3.1 2.4 27.6 -31.9 15.6 16.3 -73.5
 ASP-367   SER-368  1.9 1.4 39.4 -34.7 54.8 54.1 98.0
 SER-368   TYR-369  5.2 4.9 41.5 -52.0 76.3 69.1 9.5
 TYR-369   LEU-370  6.1 5.7 -29.2 54.7 122.0 115.2 225.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees