Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-519
THR-520
6.7
7.0
-15.0
7.8
41.9
39.1
16.6
THR-520
LEU-521
4.2
5.2
0.4
3.3
61.4
65.2
15.1
LEU-521
GLY-522
1.6
2.7
3.3
-15.9
138.8
135.9
36.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-742
LEU-743
12.1
12.1
1.0
8.1
70.4
70.5
23.6
LEU-743
ILE-744
8.7
8.7
-2.1
11.5
161.8
148.8
37.7
ILE-744
ASP-745
9.0
9.0
-24.8
15.1
129.4
135.8
-33.0
ASP-745
SER-746
5.4
5.6
7.9
-0.7
121.9
112.7
1.9
SER-746
LYS-747
3.1
3.3
1.1
6.8
71.0
81.5
27.4
LYS-747
GLY-748
1.5
1.8
-15.6
-2.1
38.2
41.6
43.7
GLY-748
TYR-749
4.5
4.9
-6.9
3.0
71.7
74.1
-8.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees