Benzoylformate Decarboxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-453   ASN-454  7.0 7.0 -1.2 -2.8 52.5 53.2 177.9
 ASN-454   ASN-455  6.1 6.0 -2.2 4.0 63.5 64.2 -57.2
 ASN-455   GLY-456  8.6 8.6 4.1 2.9 134.8 134.9 -263.3
 GLY-456   THR-457  7.0 7.1 -7.2 -1.0 14.5 17.8 214.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-473   PRO-474  6.4 6.4 -1.8 2.2 45.4 45.3 5.5
 PRO-474   GLY-475  5.4 5.5 -1.4 4.5 41.7 42.1 13.3
 GLY-475   LEU-476  3.8 3.9 -1.6 -3.9 50.9 50.9 178.5
 LEU-476   ASP-477  4.7 4.6 5.3 -2.0 159.3 157.3 -126.3
 ASP-477   VAL-478  6.0 6.1 3.7 -2.4 120.1 119.3 -30.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees