Pantothenate Kinase 3

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-14   GLY-15  8.0 7.7 3.6 3.7 14.2 19.5 76.0
 GLY-15   MET-16  6.1 5.7 -13.3 7.4 102.6 104.0 -39.6
 MET-16   ASP-17  4.4 4.3 -5.0 4.8 151.1 150.5 -0.4
 ASP-17   ILE-18  2.3 2.2 -6.2 7.0 102.5 102.3 8.5
 ILE-18   GLY-19  5.4 5.5 -11.2 16.2 131.2 130.4 31.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-62   ILE-63  10.8 10.8 -42.7 -5.3 41.7 33.0 416.1
 ILE-63   ARG-64  10.8 10.4 1.0 3.0 70.2 74.1 16.2
 ARG-64   ASP-65  10.4 10.4 3.9 -2.1 79.3 72.6 4.2
 ASP-65   VAL-66  6.9 7.0 2.3 1.6 147.0 141.3 -31.8
 VAL-66   HIS-67  5.8 5.6 4.3 -9.3 111.3 111.6 9.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-135   LEU-136  7.9 7.7 10.2 -16.9 97.5 94.8 21.3
 LEU-136   ASP-137  7.0 6.7 2.3 3.2 69.6 70.7 12.5
 ASP-137   GLU-138  5.6 5.4 -1.9 -5.6 45.1 42.4 65.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-359   VAL-360  2.1 2.1 -4.5 3.7 120.5 117.6 6.0
 VAL-360   GLY-361  5.2 5.2 0.6 -0.9 129.5 130.0 17.0
 GLY-361   ALA-362  7.3 7.3 0.0 -0.6 105.2 102.8 12.8
 ALA-362   LEU-363  6.7 6.5 1.1 -5.4 43.2 43.2 -19.2
 LEU-363   LEU-364  8.1 7.9 6.8 -9.4 92.4 88.4 8.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees