Nicotinamide Nucleotide Transhydrogenase, Subunit Alpha 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-939   GLN-940  9.1 8.8 -3.8 -2.1 83.4 81.8 86.9
 GLN-940   SER-941  6.5 6.2 0.0 -6.3 41.8 45.9 64.6
 SER-941   ASN-942  8.9 8.6 6.2 -6.5 155.4 159.1 11.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-1126   VAL-1127  5.2 5.4 -1.2 5.1 119.5 117.6 16.5
 VAL-1127   ALA-1128  2.2 2.3 -7.7 7.7 37.7 39.1 6.0
 ALA-1128   ALA-1129  3.1 3.3 -5.2 6.3 94.3 93.8 40.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees