2,4-Dienoyl-Coa Reductase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-172   PRO-173  2.2 2.3 0.6 0.4 78.0 79.2 -5.8
 PRO-173   LEU-174  2.9 2.9 -3.8 6.5 40.6 41.7 -125.7
 LEU-174   THR-175  3.7 3.6 -3.5 1.2 37.0 37.5 116.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-294   THR-295  9.0 9.1 -4.0 1.3 69.0 70.4 43.9
 THR-295   TYR-296  8.7 8.7 5.4 -2.9 114.2 113.3 -4.1
 TYR-296   GLY-297  6.5 6.6 -6.3 3.3 69.8 70.5 65.2
 GLY-297   GLY-298  9.4 9.6 -1.0 -3.5 119.5 117.9 -60.0
 GLY-298   MET-299  12.9 13.2 -46.9 31.5 61.1 69.1 275.6
 MET-299   SER-300  16.4 16.5 88.8 6.8 59.3 47.8 1968.8
 SER-300   PHE-301  17.9 19.7 -80.6 -1.6 141.1 167.3 -2662.5
 PHE-301   GLN-302  18.8 17.9 -5.3 32.6 92.5 123.2 -67.7
 GLN-302   PRO-303  18.4 18.5 28.2 -1.6 61.9 64.6 517.7
 PRO-303   VAL-304  16.1 16.1 -0.2 1.0 77.5 76.6 -23.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-319   GLY-320  7.5 7.5 -0.5 1.5 41.5 38.4 -87.8
 GLY-320   PHE-321  5.0 5.0 0.1 -2.2 133.5 133.8 50.7
 PHE-321   TRP-322  3.2 3.2 1.5 -1.8 110.4 110.9 25.3
 TRP-322   VAL-323  1.3 1.3 4.6 -5.2 118.4 117.1 -23.7
 VAL-323   THR-324  1.9 2.0 -1.5 8.3 101.3 99.6 136.2
 THR-324   GLU-325  5.3 5.4 3.9 -11.8 36.3 36.5 -150.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-328   ASN-329  9.9 9.7 -0.1 6.7 85.8 81.6 -216.7
 ASN-329   ASN-330  12.5 12.2 -8.7 -0.5 107.0 110.6 264.2
 ASN-330   LYS-331  12.3 12.2 0.6 2.2 6.5 5.8 73.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-338   ASN-339  8.8 8.6 1.0 -4.0 144.8 142.5 62.2
 ASN-339   GLN-340  11.8 11.6 2.7 -2.6 108.8 109.7 7.0
 GLN-340   ILE-341  11.3 11.2 4.6 -0.5 122.7 121.8 -61.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees