Glutamate Receptor Ionotropic, Nmda 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-143
GLN-144
6.9
7.0
-17.0
0.1
54.8
51.7
51.2
GLN-144
GLY-145
3.3
3.4
12.2
2.2
53.0
56.7
40.4
GLY-145
LEU-146
1.1
0.3
3.6
-11.6
122.8
123.0
14.3
LEU-146
THR-147
4.0
3.8
-0.8
-1.3
54.4
57.2
0.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-245
PHE-246
6.3
6.0
-8.4
7.2
71.6
72.2
17.2
PHE-246
ARG-247
3.7
3.6
-4.9
8.3
112.1
112.2
7.3
ARG-247
SER-248
2.4
1.6
-9.0
-2.6
60.2
61.5
38.2
SER-248
GLY-249
2.9
2.7
-14.1
17.8
122.9
123.3
10.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees