6-Phosphogluconate Dehydrogenase, Decarboxylating

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-101   ASN-102  7.8 7.7 -4.0 -6.0 69.9 78.6 8.8
 ASN-102   THR-103  7.9 7.7 1.2 -3.5 175.9 176.9 20.7
 THR-103   PHE-104  6.8 6.4 3.7 -1.5 119.5 119.1 22.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-109   ARG-110  1.9 2.2 1.0 2.0 51.2 48.0 12.6
 ARG-110   ARG-111  3.5 3.4 -3.6 0.8 61.7 66.6 23.4
 ARG-111   ASN-112  6.2 6.3 -0.3 -2.5 71.0 73.0 0.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-123   GLY-124  6.6 6.4 -7.0 6.3 85.5 91.4 -39.3
 GLY-124   THR-125  3.2 3.1 9.2 -1.8 41.3 36.3 41.5
 THR-125   GLY-126  1.5 1.5 -1.9 -5.3 105.1 106.3 0.0
 GLY-126   VAL-127  2.7 2.6 -1.0 0.3 17.0 15.6 -3.1
 GLY-126   VAL-127  2.7 2.6 -1.0 0.3 17.0 15.6 -3.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-126   VAL-127  2.7 2.6 -1.0 0.3 17.0 15.6 -3.1
 GLY-126   VAL-127  2.7 2.6 -1.0 0.3 17.0 15.6 -3.1
 VAL-127   SER-128  4.0 3.9 -11.9 15.0 74.5 73.8 -10.2
 SER-128   GLY-129  6.5 6.4 3.0 -9.6 171.0 167.7 48.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-136   GLY-137  6.1 6.3 -4.5 0.5 70.4 74.5 9.1
 GLY-137   PRO-138  3.2 3.1 -9.6 5.7 49.7 47.5 29.3
 PRO-138   SER-139  3.6 3.4 2.5 -12.0 107.9 106.0 11.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-144   GLN-145  7.2 7.5 16.4 -2.0 89.7 95.2 15.3
 GLN-145   LYS-146  11.0 11.3 -16.6 -1.6 16.9 20.5 127.7
 LYS-146   GLU-147  12.7 12.7 -3.8 1.1 67.4 61.3 41.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-152   ALA-153  11.1 12.1 -0.8 -0.1 132.9 132.3 7.6
 ALA-153   PRO-154  10.1 10.6 12.6 -5.4 19.1 13.3 83.6
 PRO-154   ILE-155  11.5 12.0 11.6 -4.7 74.6 74.6 23.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-156   THR-157  6.4 6.9 -4.0 1.3 38.7 42.2 33.1
 THR-157   LYS-158  6.7 7.1 15.6 -27.1 143.5 150.5 50.7
 LYS-158   ILE-159  7.2 7.0 13.6 1.4 92.5 89.1 -39.9
 ILE-159   ALA-160  5.1 5.0 -0.5 -1.2 84.0 81.6 8.7
 ILE-159   ALA-160  5.1 5.0 -0.5 -1.2 84.0 81.6 8.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-159   ALA-160  5.1 5.0 -0.5 -1.2 84.0 81.6 8.7
 ILE-159   ALA-160  5.1 5.0 -0.5 -1.2 84.0 81.6 8.7
 ALA-160   ALA-161  1.7 1.7 8.2 -10.4 31.6 33.3 -7.9
 ALA-161   VAL-162  1.5 1.6 -4.4 13.7 101.6 103.9 73.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees