Endoplasmic Reticulum Aminopeptidase 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-700   ALA-701  8.5 8.2 -1.1 4.1 103.2 103.2 -10.8
 ALA-701   PHE-702  8.1 8.1 -10.4 6.1 52.3 57.6 46.0
 PHE-702   LEU-703  6.1 5.8 -6.7 4.0 103.8 108.2 -33.1
 LEU-703   ILE-704  3.7 3.5 1.1 -5.5 41.8 37.3 -7.1
 ILE-704   ARG-705  2.9 3.1 5.7 -4.7 105.8 101.4 -0.6
 ARG-705   LEU-706  4.7 4.8 1.8 -1.9 122.8 118.3 12.7
 LEU-706   LEU-707  2.3 2.6 -4.6 4.4 122.7 128.2 26.6

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees