Endoplasmin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-161   ASN-162  22.8 22.9 -4.3 4.0 55.6 54.7 -4.8
 ASN-162   LEU-163  20.6 20.8 38.6 -28.5 77.3 78.1 2.6
 LEU-163   GLY-164  20.2 19.8 17.9 -48.1 14.3 18.5 -45.7
 GLY-164   THR-165  20.9 19.6 44.6 -75.7 61.9 68.2 -15.0
 THR-165   ILE-166  18.1 18.1 -155.9 -24.4 68.2 42.5 223.3
 ILE-166   ALA-167  15.7 16.1 59.9 26.3 74.6 108.0 -127.4
 ALA-167   LYS-168  17.2 19.4 -6.3 19.2 167.8 19.8 14.1
 LYS-168   SER-169  17.5 19.1 20.5 120.8 65.7 96.1 -124.4
 SER-169   GLY-170  14.5 18.9 -139.9 -3.3 136.5 94.8 -69.7
 GLY-170   THR-171  16.1 15.4 171.6 -11.8 47.2 66.6 229.0
 THR-171   SER-172  14.5 13.6 17.6 3.5 80.9 45.7 17.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-193   GLN-194  4.4 8.2 -9.6 9.3 90.3 98.0 -6.3
 GLN-194   PHE-195  6.3 8.4 -29.5 -13.0 97.2 57.7 26.2
 PHE-195   GLY-196  9.3 10.8 21.9 166.8 17.4 93.3 204.6
 GLY-196   VAL-197  9.0 12.4 22.1 26.5 51.6 147.5 -36.4
 VAL-197   GLY-198  8.8 12.1 -124.1 -144.8 74.0 90.6 -10.2
 GLY-198   PHE-199  11.9 11.9 160.4 6.0 103.8 107.7 -76.2
 PHE-199   TYR-200  15.3 15.4 -2.8 -8.6 48.0 42.9 10.2
 TYR-200   SER-201  14.1 14.4 7.8 -5.2 68.9 76.3 -5.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees