DNA Polymerase IV
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASN-1147
LYS-1148
2.5
2.4
-3.7
0.0
79.2
79.2
18.2
LYS-1148
VAL-1149
1.3
1.4
-6.4
5.8
36.7
33.0
-1.0
VAL-1149
PHE-1150
3.2
3.3
4.3
0.7
151.3
148.9
-52.2
PHE-1150
ALA-1151
0.7
0.7
0.4
-2.2
90.8
91.6
-6.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-1167
ASP-1168
8.0
7.9
20.9
-23.2
88.8
85.2
-12.0
ASP-1168
GLU-1169
9.3
9.2
1.4
-18.5
149.7
140.9
123.1
GLU-1169
GLU-1170
9.8
9.7
12.3
4.3
107.2
113.3
-48.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-1233
ASN-1234
7.5
7.6
-11.1
-4.2
68.0
73.1
227.1
ASN-1234
GLU-1235
5.5
5.5
17.3
-23.8
150.7
163.2
52.4
GLU-1235
PRO-1236
4.0
4.2
17.0
1.0
104.3
103.3
-134.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees