Histidyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-177   TYR-178  8.0 7.6 5.5 -3.2 101.0 101.5 4.8
 TYR-178   LEU-179  6.1 5.6 -6.9 5.4 59.7 56.5 -3.0
 LEU-179   ARG-180  2.7 2.2 -6.7 5.5 13.1 14.2 9.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-196   ARG-197  10.7 11.1 -19.1 9.7 23.5 26.5 65.3
 ARG-197   LEU-198  9.7 10.0 3.3 -5.6 91.8 90.7 6.4
 LEU-198   GLU-199  6.9 6.9 7.6 14.9 88.2 85.8 -1.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-200   ASN-201  12.2 11.6 166.1 -139.5 21.2 42.7 196.2
 ASN-201   PRO-202  10.1 9.8 -20.8 -1.3 86.2 74.0 51.9
 PRO-202   MET-203  6.3 6.4 12.4 14.3 42.6 47.4 141.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-222   ARG-223  5.8 5.9 -47.2 -5.8 10.3 3.2 387.9
 ARG-223   PRO-224  5.5 5.9 4.5 12.6 118.7 116.6 -100.8
 PRO-224   MET-225  3.4 3.8 0.7 0.0 106.0 102.9 -8.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-254   PRO-255  7.8 7.5 39.6 6.3 136.9 126.1 -264.8
 PRO-255   ALA-256  5.7 6.1 -32.7 -66.5 42.4 60.9 532.8
 ALA-256   LEU-257  7.7 5.2 109.1 -29.3 79.2 79.5 126.7
 LEU-257   VAL-258  7.6 7.5 -42.8 61.2 66.3 66.4 -67.6
 VAL-258   ARG-259  6.8 8.0 -39.5 59.7 89.2 101.2 37.0
 ARG-259   GLY-260  9.0 11.1 58.1 -12.0 137.8 144.0 -283.9
 GLY-260   LEU-261  9.5 14.1 24.9 -53.9 89.5 96.3 -28.7
 LEU-261   ASP-262  12.7 15.1 1.5 -24.1 63.1 92.4 -49.5
 ASP-262   TYR-263  13.2 13.9 20.0 5.3 20.7 49.9 157.0
 TYR-263   TYR-264  14.9 15.4 -1.0 13.7 136.0 136.4 33.5
 TYR-264   VAL-265  11.9 12.3 21.9 -20.1 76.2 93.7 -68.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees