Fatty Oxidation Complex Alpha Subunit

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-281   ALA-282  6.3 6.8 -0.9 -8.0 160.8 169.2 -81.6
 ALA-282   LYS-283  4.6 5.5 -12.0 1.1 133.0 126.6 -71.7
 LYS-283   THR-284  8.0 9.0 6.1 -57.7 98.7 102.3 136.4
 THR-284   SER-285  9.9 11.0 124.2 13.7 45.1 88.7 474.4
 SER-285   ALA-286  11.7 10.4 -24.3 -26.4 70.5 137.0 -146.5
 ALA-286   SER-287  11.4 7.7 45.7 0.7 75.3 21.7 310.5
 SER-287   ASN-288  7.7 8.4 28.9 -17.3 20.1 50.4 81.2
 ASN-288   CYS-289  7.7 10.5 81.6 138.8 74.7 88.9 -106.7
 CYS-289   LEU-290  11.2 7.7 153.9 -39.5 113.9 139.5 -605.6
 LEU-290   ILE-291  10.7 5.6 17.6 5.9 56.4 53.9 194.4
 ILE-291   GLY-292  8.1 5.5 -14.7 5.1 148.2 92.7 -68.4
 GLY-292   LEU-293  10.3 9.3 -18.2 5.3 82.0 41.0 15.0
 LEU-293   PHE-294  13.3 10.2 2.5 -7.6 83.6 90.9 -16.9
 PHE-294   LEU-295  12.0 8.8 -16.4 3.9 162.9 133.0 -80.8
 LEU-295   ASN-296  11.2 10.5 9.2 -6.4 66.8 97.8 -8.0
 ASN-296   ASP-297  14.6 13.4 12.9 -18.7 103.7 130.4 59.1
 ASP-297   GLN-298  16.4 13.9 6.2 2.0 55.4 62.6 70.4
 GLN-298   GLU-299  15.1 14.0 -8.3 5.6 152.6 118.7 -38.5
 GLU-299   LEU-300  16.1 16.5 8.1 -10.0 94.4 126.8 -15.9
 LEU-300   LYS-301  19.5 18.6 -9.9 5.6 85.0 68.5 -21.8
 LYS-301   LYS-302  20.1 18.8 5.4 -14.2 30.1 47.9 -53.8
 LYS-302   LYS-303  19.5 20.2 -3.4 8.2 120.2 101.4 -23.9
 LYS-303   ALA-304  21.9 22.3 -19.5 -3.6 62.8 44.2 132.8
 ALA-304   LYS-305  24.2 23.7 27.9 -30.2 66.1 88.3 -27.0
 LYS-305   VAL-306  24.7 24.5 -1.8 6.6 150.9 138.7 26.9
 VAL-306   TYR-307  25.4 26.1 -1.4 -2.4 82.1 71.8 -12.3
 TYR-307   ASP-308  28.1 28.3 0.0 15.0 73.3 51.7 -59.1
 ASP-308   LYS-309  29.6 28.8 -28.2 -52.5 132.6 104.4 -337.8
 LYS-309   ILE-310  30.2 31.1 61.5 -4.5 72.9 34.5 333.8
 ILE-310   ALA-311  33.1 32.8 -3.6 -2.0 44.0 62.2 2.8
 ALA-311   LYS-312  33.8 34.0 18.9 3.3 114.9 108.3 -62.3
 LYS-312   ASP-313  37.3 37.6 16.1 -12.7 168.1 178.5 -39.2
 ASP-313   VAL-314  37.4 38.3 -9.7 -6.8 75.0 70.5 53.4
 VAL-314   LYS-315  39.4 39.7 -11.7 -2.3 35.1 30.9 105.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-663   PHE-664  24.4 25.3 11.0 -9.6 104.6 103.0 8.4
 PHE-664   PRO-665  22.5 23.1 -1.1 3.5 122.5 123.6 27.1
 PRO-665   LEU-666  19.9 20.4 2.7 -2.0 111.8 112.1 27.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-667   ARG-668  14.5 14.5 -1.1 9.9 142.2 135.7 77.8
 ARG-668   GLY-669  16.5 16.3 5.1 11.5 36.4 30.0 88.4
 GLY-669   GLY-670  15.6 15.7 -55.7 39.5 124.2 110.8 -99.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees