Cmp/dcmp-Type Deaminase Domain-Containing Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-6   LYS-7  1.1 1.2 -1.7 -2.6 53.6 52.2 111.7
 LYS-7   TYR-8  4.5 4.5 -0.9 4.6 23.5 24.4 -117.9
 TYR-8   LEU-9  3.8 3.8 -1.5 -2.4 60.3 60.8 104.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-20   PRO-21  8.6 8.6 5.8 4.8 112.2 107.0 -75.3
 PRO-21   ARG-22  11.6 11.6 14.4 -20.4 44.1 42.3 -123.1
 ARG-22   PRO-23  12.9 12.8 7.7 -18.9 118.4 118.5 229.4
 PRO-23   THR-24  16.4 16.1 -5.5 14.0 69.9 70.6 61.8
 THR-24   ASN-25  15.4 15.4 27.6 -64.5 121.8 130.0 524.8
 ASN-25   PHE-26  11.9 12.6 15.9 -2.8 166.2 137.8 -593.3
 PHE-26   ARG-27  10.6 10.7 23.2 -3.0 90.9 83.1 130.2
 ARG-27   VAL-28  7.7 7.8 -0.7 1.2 35.6 35.7 -2.3
 VAL-28   GLY-29  5.0 5.2 2.5 -5.2 80.7 81.3 25.2
 GLY-29   ALA-30  1.3 1.5 4.8 -3.8 120.5 122.6 -39.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-51   TYR-52  3.4 3.4 2.6 0.8 74.8 74.4 28.6
 TYR-52   THR-53  0.8 0.8 0.6 -2.4 137.5 138.3 57.7
 THR-53   MET-54  4.1 4.1 0.0 -0.2 28.2 27.6 8.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-60   HIS-61  6.9 7.0 -2.3 1.1 22.5 23.0 44.2
 HIS-61   ALA-62  7.1 7.2 1.5 -0.3 113.4 113.3 -21.4
 ALA-62   GLU-63  4.5 4.5 -0.4 -2.2 79.4 79.1 18.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees