Glycine Receptor Subunit Alphaz1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-157   LEU-158  12.9 13.0 -15.4 7.9 69.7 74.8 22.2
 LEU-158   LYS-159  10.0 9.7 -0.1 -0.4 56.7 45.0 9.4
 LYS-159   ASN-160  11.2 11.0 0.8 9.2 100.6 94.7 -1.7
 ASN-160   PHE-161  8.1 8.3 -2.7 -3.0 115.5 117.1 6.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-164   VAL-165  6.0 6.3 -17.4 -27.6 12.7 6.0 219.5
 VAL-165   GLN-166  7.0 7.7 -11.8 17.8 91.6 78.9 -22.6
 GLN-166   THR-167  8.8 9.3 7.7 -12.9 157.7 157.9 23.3
 THR-167   CYS-168  11.3 11.8 8.7 -6.4 92.4 103.4 -28.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-232   GLU-233  5.1 5.8 -19.8 22.0 41.0 36.1 -12.6
 GLU-233   ARG-234  2.9 4.0 -1.7 -14.7 60.8 58.8 77.5
 ARG-234   GLN-235  0.8 2.1 1.4 -19.7 87.8 98.8 36.7
 GLN-235   MET-236  3.0 1.8 -1.8 -1.8 20.9 18.8 5.4
 MET-236   GLY-237  4.7 2.9 9.6 11.6 107.2 107.5 2.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-283   SER-284  4.2 4.8 13.5 -5.6 106.3 95.6 -15.1
 SER-284   GLY-285  7.6 8.2 -10.7 -8.5 26.5 28.5 89.0
 GLY-285   SER-286  8.7 9.8 -11.0 8.4 35.8 38.2 13.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-287   ALA-288  8.3 7.7 14.4 -20.6 66.6 69.2 -9.6
 ALA-288   SER-289  11.4 11.1 -2.8 -11.6 171.2 175.3 -58.5
 SER-289   LEU-290  10.7 10.1 8.2 16.6 72.4 56.3 80.2
 LEU-290   PRO-291  10.2 7.8 8.6 3.2 105.4 74.9 17.4
 PRO-291   LYS-292  13.4 10.0 -7.7 -11.9 38.6 41.1 76.2
 LYS-292   VAL-293  14.3 12.4 -7.0 -6.6 104.9 99.8 2.1
 VAL-293   SER-294  13.9 12.7 -2.3 -20.0 39.2 23.3 91.4
 SER-294   TYR-295  15.2 14.3 44.6 -27.9 92.5 96.1 -62.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees