V-Type Atp Synthase Subunit F

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-2   PRO-3  5.2 4.1 -23.6 23.7 124.8 130.5 141.1
 PRO-3   VAL-4  2.3 2.2 -23.9 32.4 157.3 166.5 298.1
 VAL-4   ARG-5  3.3 3.2 2.8 13.4 68.5 64.3 -13.1
 ARG-5   MET-6  1.0 0.8 -0.5 -6.1 151.6 149.9 -128.5
 MET-6   ALA-7  3.7 3.5 -1.2 4.4 118.8 117.8 24.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-39   THR-40  5.2 4.7 24.4 -30.0 40.1 48.9 -29.4
 THR-40   LEU-41  7.9 7.4 -5.4 14.2 156.7 153.7 41.4
 LEU-41   VAL-42  5.4 5.1 11.3 10.6 77.3 81.3 178.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-45   GLY-46  7.1 7.4 -15.5 -16.4 40.6 42.3 291.4
 GLY-46   TYR-47  4.9 5.4 41.5 -26.3 85.7 91.4 37.7
 TYR-47   ALA-48  1.5 1.8 7.8 -4.6 84.3 84.7 -69.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-65   ARG-66  8.0 7.9 -10.3 -25.8 66.8 82.0 38.6
 ARG-66   LEU-67  5.4 5.4 11.4 15.3 44.4 41.3 321.3
 LEU-67   MET-68  5.7 5.5 -5.0 -26.3 104.1 94.9 -177.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees