Proto-Oncogene Serine/threonine-Protein Kinase Pim-1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-89   VAL-90  4.0 3.9 6.7 -6.4 54.3 53.5 68.9
 VAL-90   VAL-91  5.8 5.6 -0.3 -0.7 73.9 71.8 10.5
 VAL-91   LEU-92  5.6 5.4 6.5 -6.8 67.5 70.6 -11.9
 LEU-92   LEU-93  2.8 2.6 -1.0 -1.0 173.3 170.2 -38.1
 LEU-93   LYS-94  2.6 2.4 1.0 8.2 69.7 73.4 71.6
 LYS-94   LYS-95  6.4 6.2 -13.4 9.7 77.3 78.1 -6.9
 LYS-95   VAL-96  7.2 7.0 -2.5 5.6 127.0 128.7 23.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-103   ILE-104  5.3 5.4 -11.4 6.8 59.4 58.9 122.7
 ILE-104   ARG-105  2.2 2.4 -8.6 3.2 107.2 101.6 -35.8
 ARG-105   LEU-106  1.8 1.8 -9.0 9.1 101.3 100.2 8.1
 LEU-106   LEU-107  4.3 4.2 14.2 -15.8 123.4 124.6 33.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-118   ILE-119  9.4 9.4 -0.6 -0.2 166.6 166.6 -44.7
 ILE-119   LEU-120  8.5 8.5 1.3 -0.5 86.4 84.9 73.4
 LEU-120   GLU-121  5.0 5.1 -2.1 5.8 163.8 162.8 13.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees