Benzoylformate Decarboxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-453   ASN-454  3.0 3.0 2.4 0.3 45.3 43.9 8.8
 ASN-454   ASN-455  3.0 3.0 -0.8 2.6 109.5 110.2 56.3
 ASN-455   GLY-456  5.8 5.8 -5.1 4.6 146.6 145.3 6.2
 GLY-456   THR-457  5.4 5.4 -4.0 -0.6 157.2 156.9 -71.4
 THR-457   TYR-458  4.4 4.3 3.0 -2.4 86.6 89.1 1.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-476   ASP-477  3.5 3.3 -3.9 7.7 154.0 152.6 14.3
 ASP-477   VAL-478  5.0 4.9 -1.0 0.5 105.9 108.2 1.1
 VAL-478   PRO-479  4.7 4.6 -0.2 5.1 139.4 138.2 39.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees