Adp-Ribosylation Factor 6

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-28   ILE-29  6.5 5.9 -5.0 9.1 127.6 136.3 4.7
 ILE-29   LEU-30  5.9 5.6 0.9 7.7 73.1 85.3 -3.3
 LEU-30   TYR-31  2.2 2.2 -6.0 -25.9 130.7 130.4 -17.6
 TYR-31   LYS-32  3.1 1.9 17.2 -0.5 22.5 25.6 14.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-47   ASN-48  1.0 2.7 59.9 -20.8 141.0 141.1 -11.7
 ASN-48   VAL-49  2.1 3.2 31.3 -32.6 132.3 120.9 5.8
 VAL-49   GLU-50  3.9 5.9 -2.7 -32.0 32.1 24.5 26.9
 GLU-50   THR-51  4.1 6.1 9.8 18.3 116.9 117.0 -9.2
 THR-51   VAL-52  7.2 8.6 -2.9 -0.7 19.7 25.3 -1.1
 VAL-52   THR-53  7.3 7.3 0.0 -10.0 66.0 53.7 -10.4
 THR-53   TYR-54  10.4 9.5 -26.2 -14.2 14.5 39.2 32.6
 TYR-54   LYS-55  10.4 9.6 17.3 14.4 108.1 103.2 -15.3
 LYS-55   ASN-56  14.0 12.6 164.4 154.3 41.8 72.0 -32.2
 ASN-56   VAL-57  16.2 14.6 8.7 -25.0 56.0 18.3 -20.4
 VAL-57   LYS-58  13.4 14.4 -0.6 33.3 136.5 123.4 32.4
 LYS-58   PHE-59  11.8 13.0 -26.4 23.5 115.4 145.8 -3.0
 PHE-59   ASN-60  9.0 11.2 -12.1 13.7 149.8 133.4 18.6
 ASN-60   VAL-61  7.9 10.8 -46.0 35.4 96.8 125.8 -15.4
 VAL-61   TRP-62  5.1 7.8 -14.0 56.0 149.5 144.4 39.1
 TRP-62   ASP-63  4.1 6.8 -40.5 -22.1 100.2 105.0 -10.9
 ASP-63   VAL-64  5.8 3.8 -23.1 -19.9 139.2 166.5 -35.2
 VAL-64   GLY-65  8.6 4.2 -49.7 -134.1 119.1 107.0 77.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees