Adenylate Kinase (Adk) (E.C.2.7.4.3)
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-115
ILE-116
3.6
3.6
-17.5
-3.8
48.4
49.9
40.2
ILE-116
VAL-117
2.2
2.0
16.6
-19.8
101.9
110.6
21.4
VAL-117
ASP-118
2.0
3.1
16.3
-4.1
54.0
51.5
8.0
ASP-118
ARG-119
3.1
3.7
-12.4
7.3
93.2
92.7
-19.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ARG-156
LYS-157
11.0
11.1
10.8
0.5
60.0
61.9
12.8
LYS-157
ASP-158
10.1
9.5
2.6
16.7
96.5
104.7
-15.3
ASP-158
ASP-159
6.3
6.1
-46.6
27.5
25.3
29.1
35.7
ASP-159
GLN-160
6.2
6.6
-65.6
53.1
81.6
89.7
29.3
GLN-160
GLU-161
6.5
7.9
-10.2
0.8
75.6
77.9
20.0
GLU-161
GLU-162
5.3
7.5
-13.7
11.3
133.3
138.3
-4.1
GLU-162
THR-163
5.8
8.3
-5.3
0.5
118.0
117.9
-6.5
THR-163
VAL-164
2.6
5.0
-1.6
4.3
55.9
55.4
-3.4
VAL-164
ARG-165
0.7
3.0
-31.9
15.2
89.1
89.6
3.6
ARG-165
LYS-166
4.4
5.9
0.6
-2.2
32.8
31.6
4.4
LYS-166
ARG-167
4.0
5.9
0.1
2.2
100.3
85.3
16.3
ARG-167
LEU-168
3.9
3.5
-10.6
6.9
57.1
58.6
4.4
LEU-168
VAL-169
6.4
6.0
-0.4
-6.8
123.1
111.3
-12.3
VAL-169
GLU-170
8.7
9.0
7.5
0.6
59.9
42.1
-1.4
GLU-170
TYR-171
8.6
8.2
11.7
-14.4
128.4
107.0
2.1
TYR-171
HIS-172
9.9
8.9
-0.5
-0.5
76.2
72.1
14.9
HIS-172
GLN-173
12.3
11.8
-7.6
16.5
140.3
132.4
1.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees