Glutamate Receptor 4,Glutamate Receptor

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-104   MET-105  11.0 10.9 -1.2 -4.6 102.7 102.4 -73.1
 MET-105   SER-106  9.4 9.4 -0.7 11.8 151.3 146.0 295.1
 SER-106   LEU-107  8.5 8.3 6.3 3.6 90.1 94.7 -232.9
 LEU-107   GLY-108  6.7 6.4 0.5 5.7 41.9 38.2 133.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-137   SER-138  12.2 12.5 4.4 0.1 79.5 79.4 -0.2
 SER-138   GLY-139  10.8 11.2 7.2 -14.6 101.9 99.7 192.9
 GLY-139   SER-140  7.4 7.8 11.7 1.9 169.3 169.3 -366.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-143   PHE-144  9.7 9.9 -1.2 2.5 153.0 151.7 -2.9
 PHE-144   PHE-145  7.3 7.5 -1.4 -1.3 125.1 126.8 -40.7
 PHE-145   ARG-146  10.5 10.6 1.6 -2.3 74.9 74.1 7.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-216   GLY-217  4.2 4.2 2.4 2.4 30.9 31.4 9.4
 GLY-217   TYR-218  5.7 5.6 7.9 -2.0 35.7 37.2 94.0
 TYR-218   GLY-219  5.4 5.3 3.7 -0.8 77.1 77.4 58.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-240   GLU-241  18.0 18.0 -0.4 -1.8 107.8 108.9 22.4
 GLU-241   ALA-242  21.6 21.6 7.6 -3.1 127.0 129.9 -87.7
 ALA-242   GLY-243  23.0 23.0 -0.5 -1.5 85.4 83.3 56.4
 GLY-243   VAL-244  21.1 21.3 -3.2 2.8 40.0 41.8 45.6
 VAL-244   LEU-245  19.0 19.1 -3.1 1.4 101.7 103.1 -63.9
 LEU-245   ASP-246  15.7 15.8 -0.3 6.9 107.8 106.7 -16.1
 ASP-246   LYS-247  17.5 17.8 -7.3 5.0 38.0 36.3 42.4
 LYS-247   LEU-248  19.1 19.1 0.4 -0.5 121.0 116.8 -2.6
 LEU-248   LYS-249  15.7 15.6 -2.9 -0.7 117.9 119.6 53.2
 LYS-249   ASN-250  14.6 14.7 0.4 -10.3 99.4 96.0 2.1
 ASN-250   LYS-251  18.1 18.1 15.2 -15.0 159.5 157.7 25.8
 LYS-251   TRP-252  17.6 17.7 -2.8 8.3 82.7 82.2 -57.3
 TRP-252   TRP-253  14.6 14.6 3.0 -5.6 52.2 50.5 -118.2
 TRP-253   TYR-254  15.6 15.7 58.7 57.8 87.5 87.0 589.2
 TYR-254   ASP-255  19.3 19.4 159.6 -26.1 130.7 91.1 1704.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees