DNA Mismatch Repair Protein Mutl

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-467   ARG-468  1.7 2.0 -0.1 4.2 80.8 82.8 0.5
 ARG-468   GLN-469  3.2 3.3 -3.8 0.8 63.6 58.6 30.3
 GLN-469   ALA-470  3.9 3.7 -5.6 2.8 8.6 11.2 16.0
 ALA-470   GLN-471  2.1 1.9 4.0 -4.8 111.7 110.0 -6.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-558   GLN-559  9.7 9.6 -13.3 6.9 45.5 45.5 44.0
 GLN-559   TRP-560  8.7 8.5 0.1 0.0 156.4 160.0 2.7
 TRP-560   ILE-561  10.7 10.5 -3.3 4.2 77.2 71.2 -29.3
 ILE-561   ALA-562  9.8 9.7 5.0 -7.1 104.8 103.2 1.7
 ALA-562   ARG-563  5.9 5.9 -10.6 3.2 20.8 28.5 51.4
 ARG-563   ASN-564  6.3 6.0 -35.7 13.1 44.0 32.2 175.9
 ASN-564   LEU-565  8.3 8.3 -45.0 -15.7 90.6 80.5 167.7
 SER-567   GLU-568  4.9 8.8 -9.4 -22.5 103.4 65.1 -76.2
 GLU-568   HIS-569  6.8 6.4 -115.8 -21.7 48.2 97.8 412.9
 HIS-569   ALA-570  8.6 7.1 -94.3 89.7 23.3 31.8 59.8
 ALA-570   GLN-571  7.9 9.0 -98.1 62.3 78.8 101.8 -9.3
 GLN-571   TRP-572  10.7 10.9 24.3 -7.6 21.5 18.3 115.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees