Mad1 (Mitotic Arrest Deficient)-Like 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-527   ARG-528  12.7 12.2 -10.3 14.7 121.3 106.9 -14.7
 ARG-528   ARG-529  15.3 15.2 -22.2 18.5 127.1 115.2 -12.2
 ARG-529   ALA-530  13.3 13.2 157.8 8.5 109.7 132.3 337.2
 ALA-530   LEU-531  14.1 11.7 -9.8 19.5 67.7 63.8 -2.8
 LEU-531   GLN-532  11.1 15.1 -114.8 11.3 25.2 128.6 -273.6
 GLN-532   GLY-533  10.9 16.5 27.7 -148.1 120.9 82.8 15.7
 GLY-533   ASP-534  10.4 14.7 -54.8 8.8 119.5 124.7 -57.6
 ASP-534   TYR-535  8.0 11.5 -1.1 -63.3 62.2 62.8 51.4
 TYR-535   ASP-536  8.6 9.3 45.7 10.2 78.7 39.0 61.2
 ASP-536   GLN-537  6.8 7.3 12.8 10.1 98.1 75.7 12.1
 GLN-537   SER-538  9.9 10.2 -11.4 5.1 66.9 87.9 1.9

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees