Multidrug Transporter Mdfa

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  LEU-203   SER-204  8.0 8.7 1.5 -41.5 131.4 131.7 88.2  SER-204   LEU-205  5.1 5.8 44.4 7.1 60.9 71.9 66.4  LEU-205   LYS-206  1.7 2.1 0.6 14.2 110.7 114.4 -13.9  LYS-206   GLU-207  1.8 2.7 -30.7 17.0 105.3 123.6 -8.9  GLU-207   LEU-208  5.1 6.0 -7.8 5.4 169.7 157.3 -4.0  LEU-208   GLY-209  3.8 4.1 11.8 -5.3 82.6 90.0 9.5  GLY-209   ARG-210  4.2 4.3 -12.8 4.7 74.7 84.1 -4.7  ARG-210   ASP-211  7.1 7.6 4.5 3.5 38.4 28.6 22.3  ASP-211   TYR-212  8.3 8.3 -2.9 -5.7 128.6 124.6 -9.9 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees