Adenosylhomocysteinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-169   LYS-170  3.4 2.6 -49.4 -3.4 142.5 156.5 -348.9
 LYS-170   TYR-171  6.0 3.7 -38.5 16.5 101.6 101.1 -62.4
 TYR-171   LEU-172  7.7 7.2 -13.3 17.7 133.2 104.8 9.2
 LEU-172   PHE-173  6.0 7.0 -19.1 -15.4 155.1 158.2 -248.5
 PHE-173   ASP-174  5.1 5.2 12.5 9.6 64.8 41.0 120.6
 ASP-174   ASN-175  8.9 5.1 -80.6 1.4 87.5 99.0 70.9
 ASN-175   ARG-176  10.3 8.8 152.3 -24.2 30.1 85.3 485.5
 ARG-176   TYR-177  13.0 10.3 -53.1 26.9 128.0 136.0 -167.8
 TYR-177   GLY-178  11.0 9.7 -28.7 25.9 104.6 150.9 -48.1
 GLY-178   THR-179  7.7 7.0 26.6 11.4 43.2 50.2 175.5
 THR-179   GLY-180  8.9 9.0 12.9 -15.4 64.1 80.2 24.1
 GLY-180   GLN-181  12.3 11.9 10.6 -6.1 30.2 37.8 48.3
 GLN-181   SER-182  11.8 11.2 -18.9 10.8 138.8 146.7 -75.2
 SER-182   THR-183  8.8 8.7 4.0 -3.8 60.9 63.4 -10.2
 THR-183   TRP-184  11.5 11.7 6.4 -8.6 51.4 54.8 -24.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-335   GLY-336  3.3 3.0 9.2 -3.6 26.6 28.2 19.1
 GLY-336   HIS-337  4.1 3.8 -62.1 71.6 142.2 128.3 99.7
 HIS-337   PRO-338  3.7 3.6 8.1 -3.6 97.8 103.0 24.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees