Unconventional Myosin-Va

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-91   ARG-92  4.7 4.6 -9.7 4.2 43.4 43.1 5.5
 ARG-92   PHE-93  5.5 5.5 0.7 2.6 111.4 112.3 -2.0
 PHE-93   ILE-94  7.7 7.6 -0.3 0.1 132.4 131.2 58.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-95   SER-96  9.7 10.0 22.3 -14.9 50.8 55.3 18.1
 SER-96   LYS-97  10.2 10.4 -0.8 -1.6 146.2 152.6 -82.6
 LYS-97   LEU-98  11.2 11.1 0.1 8.1 32.8 33.4 132.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-108   ALA-109  2.1 2.3 -9.8 24.5 101.0 97.4 73.2
 ALA-109   ILE-110  4.9 5.2 -24.5 34.1 115.8 122.4 49.7
 ILE-110   ASN-111  7.8 7.7 -21.8 6.5 78.4 77.3 64.5
 ASN-111   PRO-112  11.4 11.1 4.7 -14.2 42.2 44.1 -150.5
 PRO-112   TYR-113  12.9 13.3 20.6 -13.7 89.3 92.4 -450.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-126   TYR-127  18.1 18.3 -2.9 -2.0 82.7 79.7 31.1
 TYR-127   SER-128  14.7 15.0 -8.4 4.3 33.7 31.7 66.9
 SER-128   GLY-129  15.8 16.0 -6.2 6.0 97.2 95.4 38.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-131   MET-132  14.3 15.1 6.7 0.8 136.2 130.6 -61.3
 MET-132   GLY-133  11.0 11.7 -24.5 18.5 10.0 4.8 55.2
 GLY-133   ASP-134  12.7 12.7 -5.2 9.1 69.9 66.3 54.8
 ASP-134   MET-135  15.1 15.3 8.7 -10.1 115.3 115.9 9.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-143   GLU-144  6.4 6.6 -0.3 -0.8 72.7 71.8 0.2
 GLU-144   GLU-145  9.6 9.8 1.8 1.7 98.6 98.5 27.8
 GLU-145   ALA-146  8.7 9.0 -4.8 -2.0 28.5 26.3 88.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-160   VAL-161  4.8 4.6 18.8 -19.8 148.2 147.9 1.3
 VAL-161   SER-162  6.1 6.1 -3.8 11.5 78.7 75.0 -43.1
 SER-162   GLY-163  9.0 9.0 -3.3 -6.1 25.1 32.3 138.8
 GLY-163   GLU-164  11.3 11.3 11.4 -15.7 86.8 80.2 114.0
 GLU-164   SER-165  14.7 14.7 -4.4 -2.6 118.9 118.5 41.1
 SER-165   GLY-166  16.8 15.8 -167.1 -144.6 46.3 55.3 -494.5
 GLY-166   ALA-167  16.5 16.5 -30.8 16.0 63.5 76.8 164.0
 ALA-167   GLY-168  12.9 12.8 -1.2 -9.7 110.5 119.1 -129.5
 GLY-168   LYS-169  12.2 12.8 9.8 6.1 39.6 49.8 203.7
 LYS-169   THR-170  10.5 10.5 0.0 11.4 137.1 134.9 70.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-184   GLY-185  14.4 15.0 26.8 135.1 123.3 107.5 -1085.6
 GLY-185   SER-186  15.2 18.5 -135.3 81.7 69.1 43.7 719.8
 SER-186   ALA-187  18.0 17.3 -11.7 -17.9 43.4 98.4 61.2
 ASN-191   VAL-192  17.7 18.0 -134.2 -1.8 105.0 97.9 -419.9
 VAL-192   GLU-193  14.6 14.6 4.5 1.6 37.3 23.5 -35.9
 GLU-193   GLU-194  15.8 15.2 -3.4 -1.3 87.6 93.9 -48.4
 GLU-194   LYS-195  19.0 18.5 1.9 -0.9 112.6 116.0 3.8
 LYS-195   VAL-196  17.5 17.4 -1.5 4.3 124.1 118.2 10.3
 VAL-196   LEU-197  14.8 14.6 4.5 3.2 37.7 36.2 66.6
 LEU-197   ALA-198  17.0 16.7 -8.5 4.3 74.0 72.7 -69.2
 ALA-198   SER-199  19.9 19.8 -0.9 1.5 69.3 66.1 -16.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-209   LYS-210  25.2 24.9 1.3 -24.2 175.6 169.3 352.5
 LYS-210   THR-211  26.6 26.4 -0.8 -5.1 77.6 70.1 -80.0
 THR-211   THR-212  25.8 26.1 1.6 1.0 154.1 153.7 -27.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-214   ASP-215  23.6 22.8 -6.1 -40.8 24.2 43.4 656.2
 ASP-215   ASN-216  24.6 24.1 -22.0 0.9 57.7 53.2 -261.6
 ASN-216   SER-217  22.5 22.2 13.9 4.7 89.7 80.3 -18.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-228   ASP-229  8.2 7.9 -2.6 8.5 150.2 151.9 88.0
 ASP-229   LYS-230  10.3 9.8 -2.6 -5.9 77.6 79.3 12.5
 LYS-230   ARG-231  12.4 11.7 10.0 -5.4 133.2 124.2 -115.0
 ARG-231   TYR-232  14.9 14.4 -10.2 6.5 33.4 26.8 89.5
 TYR-232   ARG-233  12.3 12.4 -7.4 7.2 78.6 81.9 -30.8
 ARG-233   ILE-234  13.5 13.7 -4.5 3.8 97.8 88.7 -31.4
 ILE-234   ILE-235  11.4 11.6 19.6 -52.0 21.9 28.0 -469.8
 ILE-235   GLY-236  10.5 10.1 -151.4 86.9 82.3 62.5 932.3
 GLY-236   ALA-237  9.9 10.2 -34.3 74.2 55.8 90.2 -523.1
 ALA-237   ASN-238  8.4 8.5 -3.9 23.1 121.0 127.1 132.8
 ASN-238   MET-239  7.7 7.8 -0.1 6.0 41.7 41.9 -88.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-436   ASP-437  7.0 6.6 -4.5 6.8 33.7 30.8 -30.0
 ASP-437   ILE-438  9.9 9.3 23.9 -13.9 90.7 91.0 67.4
 ILE-438   TYR-439  12.1 11.8 15.5 -6.5 157.3 157.8 -127.3
 TYR-439   GLY-440  14.7 14.4 6.5 4.7 118.9 120.3 93.9
 GLY-440   PHE-441  14.2 14.0 1.1 6.7 102.9 96.2 -40.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-486   ILE-487  25.9 26.3 5.2 15.8 79.8 81.9 -134.5
 ILE-487   ASP-488  22.8 23.1 -28.7 60.5 116.3 110.6 179.5
 ASP-488   PHE-489  22.7 23.7 -25.3 38.1 93.9 122.3 -14.2
 PHE-489   TYR-490  20.3 22.2 -33.8 -23.1 89.7 76.4 88.4
 TYR-490   ASP-491  20.5 21.6 2.4 -22.8 20.8 36.1 -232.4
 ASP-491   ASN-492  22.4 22.4 7.1 11.4 89.8 83.8 54.6
 ASP-491   ASN-492  22.4 22.4 7.1 11.4 89.8 83.8 54.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-491   ASN-492  22.4 22.4 7.1 11.4 89.8 83.8 54.6
 ASP-491   ASN-492  22.4 22.4 7.1 11.4 89.8 83.8 54.6
 ASN-492   GLN-493  22.2 22.3 -0.2 -0.2 29.9 33.1 -101.5
 GLN-493   PRO-494  24.2 24.2 1.5 2.8 79.2 78.4 -37.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-657   TYR-658  3.9 4.0 3.4 -10.8 116.0 114.7 89.8
 TYR-658   VAL-659  3.6 3.5 5.9 -4.2 128.8 131.2 -19.4
 VAL-659   ARG-660  2.8 2.7 22.5 -20.0 110.7 114.3 59.8
 ARG-660   CYS-661  5.7 5.5 5.8 -3.9 120.3 115.9 5.3
 CYS-661   ILE-662  7.9 7.7 -1.5 2.5 47.9 46.4 -29.5
 ILE-662   LYS-663  9.8 9.6 1.1 1.6 109.3 108.8 -85.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees