Pyridoxine 5'-Phosphate Oxidase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-84
THR-85
11.4
11.3
-1.1
8.5
135.4
136.9
47.2
THR-85
ALA-86
8.7
8.7
-0.7
-9.1
59.7
60.2
28.0
ALA-86
GLN-87
5.2
5.2
1.6
5.3
74.4
69.6
12.5
GLN-87
LEU-88
4.1
3.7
11.7
-7.7
110.6
107.4
-15.0
LEU-88
THR-89
2.1
1.9
-0.3
-1.5
91.7
90.5
1.5
THR-89
PRO-90
5.5
5.4
1.8
2.3
52.2
51.7
19.5
PRO-90
PRO-91
7.8
7.8
-2.2
0.3
52.0
54.1
7.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ARG-128
ARG-129
12.5
12.5
-5.3
5.9
109.2
109.3
34.4
ARG-129
VAL-130
9.6
9.7
-8.0
9.5
71.8
73.3
10.9
VAL-130
LEU-131
6.0
6.1
-2.9
2.5
131.0
133.8
3.1
LEU-131
LEU-132
3.1
3.3
0.4
-3.4
124.2
123.6
12.5
LEU-132
THR-133
0.8
1.1
2.3
2.8
54.8
53.4
21.6
THR-133
LEU-134
3.4
3.2
3.4
-1.3
121.4
118.7
-3.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees