Probable 6-Pyruvoyl Tetrahydrobiopterin Synthase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-38   GLU-39  0.5 0.5 -0.3 -1.4 26.8 29.2 -70.2
 GLU-39   GLY-40  1.9 2.3 -9.4 9.4 73.2 73.4 -72.1
 GLY-40   GLU-41  4.2 4.3 -4.5 -3.4 15.3 7.1 228.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-54   ILE-55  11.8 12.1 12.2 -12.4 129.3 123.2 25.2
 ILE-55   LYS-56  8.7 8.9 0.1 -1.2 137.4 133.7 -6.4
 LYS-56   ALA-57  11.6 11.6 1.2 0.4 131.6 138.3 -8.2
 ALA-57   ILE-58  13.2 13.3 0.8 -6.8 129.0 132.2 14.3
 ILE-58   PHE-59  10.2 10.2 2.8 -7.0 137.1 123.6 89.4
 PHE-59   LYS-60  8.9 8.7 4.3 -7.3 133.6 128.6 -9.8
 LYS-60   PRO-61  12.4 12.2 -5.0 -6.1 11.7 1.4 176.5
 PRO-61   ILE-62  11.7 12.1 10.7 3.3 115.2 116.2 -146.9
 ILE-62   TYR-63  8.6 8.7 3.2 -4.8 88.7 88.1 -76.0
 TYR-63   GLU-64  11.1 11.0 -2.7 13.0 40.9 45.0 -84.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-91   GLN-92  2.3 2.5 -1.4 2.0 92.4 89.9 -16.1
 GLN-92   LEU-93  2.7 2.7 4.0 -18.8 154.2 148.6 110.2
 LEU-93   LYS-94  3.1 3.3 -3.9 4.7 61.1 57.8 -2.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-99   LEU-100  4.6 4.4 -3.1 5.2 72.1 70.4 103.2
 LEU-100   SER-101  1.7 1.7 -9.3 8.1 101.4 101.9 -40.4
 SER-101   LYS-102  3.7 3.8 -3.0 -5.3 64.5 61.7 15.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees