Tyrosyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-108   GLN-109  5.6 6.0 9.2 -13.4 77.2 73.8 -28.4
 GLN-109   LEU-110  7.8 7.8 1.2 15.4 23.2 21.4 117.2
 LEU-110   ASP-111  8.6 8.7 -8.6 9.6 127.2 126.9 19.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-155   VAL-156  11.3 11.8 18.2 -31.6 85.3 82.6 22.1
 VAL-156   ASN-157  11.3 11.8 41.9 9.2 128.1 133.7 -352.5
 ASN-157   ASP-158  9.0 9.5 161.1 6.3 69.1 68.1 1123.3
 ASP-158   ILE-159  6.7 8.0 24.9 -14.8 52.1 91.7 12.3
 ILE-159   HIS-160  6.5 4.3 31.2 -9.9 119.1 41.5 -1066.5
 HIS-160   TYR-161  6.9 4.4 25.3 -55.1 113.9 44.1 721.8
 TYR-161   LEU-162  3.6 4.6 50.6 11.2 53.3 101.6 -869.2
 LEU-162   GLY-163  1.4 4.8 135.8 16.5 62.8 51.3 1061.8
 GLY-163   VAL-164  4.8 5.7 -23.6 -29.3 174.2 147.2 -527.1
 VAL-164   ASP-165  4.3 4.1 -22.0 -1.3 118.0 119.2 63.0
 ASP-165   VAL-166  6.9 6.5 -6.5 -4.3 124.8 120.0 -42.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-168   GLY-169  7.4 7.4 -7.5 12.3 110.3 110.5 42.9
 GLY-169   GLY-170  11.0 10.9 -21.9 32.4 45.5 43.6 -54.7
 GLY-170   MET-171  14.4 14.1 -11.7 6.9 95.6 99.6 -6.5
 MET-171   GLU-172  17.1 16.5 -110.4 114.5 146.4 140.3 31.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-187   VAL-188  13.3 13.0 5.1 -12.2 59.6 65.2 -15.3
 VAL-188   VAL-189  10.4 9.8 -14.5 26.8 151.8 149.1 107.4
 VAL-189   CYS-190  10.1 9.9 0.4 2.2 88.1 87.0 -2.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees