Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-31   THR-32  8.9 7.9 90.1 -68.5 81.0 86.2 121.5
 THR-32   PRO-33  8.7 7.3 13.0 -39.7 148.1 142.9 82.5
 PRO-33   SER-34  6.2 5.1 -30.3 24.0 80.2 91.2 68.5
 SER-34   GLN-35  7.8 7.7 9.6 13.2 82.2 87.1 60.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-90   GLU-91  5.2 5.4 15.2 5.5 8.7 7.4 110.6
 GLU-91   LYS-92  5.5 5.7 -6.3 10.9 104.6 100.9 39.0
 LYS-92   ARG-93  2.6 2.8 -23.7 14.0 73.9 81.4 -19.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-102   LEU-103  7.4 7.3 -23.5 26.6 140.4 137.3 19.1
 LEU-103   VAL-104  5.4 5.5 4.2 -8.9 95.8 99.5 21.0
 VAL-104   LYS-105  2.2 2.6 -7.9 13.7 128.4 129.0 17.1
 LYS-105   LEU-106  1.5 1.1 -0.6 -0.8 123.2 125.2 -27.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-122   VAL-123  6.2 6.5 -25.9 40.6 141.4 142.0 74.6
 VAL-123   ALA-124  5.4 5.6 -34.5 30.5 117.3 124.6 46.9
 ALA-124   GLY-125  8.0 7.9 -34.2 2.4 107.3 115.9 -68.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-309   VAL-310  12.2 12.1 27.2 -23.1 128.3 133.4 -15.9
 VAL-310   GLU-311  12.5 12.2 -3.2 -3.6 68.9 67.5 25.1
 GLU-311   ALA-312  10.1 10.0 -7.7 -3.8 114.7 105.7 -45.9
 ALA-312   PRO-313  8.9 9.3 -4.3 -3.1 53.0 46.3 13.3
 PRO-313   PHE-314  11.5 11.6 -12.2 52.4 64.6 83.2 35.3
 PHE-314   ILE-315  9.2 10.1 2.1 -32.7 53.5 78.5 -71.7
 ILE-315   PRO-316  6.3 7.5 45.9 -63.6 91.9 86.0 -40.6
 PRO-316   LYS-317  8.4 8.3 9.2 -46.5 107.8 113.0 61.0
 LYS-317   PHE-318  9.1 8.6 -17.4 -37.1 133.8 127.3 -209.0
 ASP-329   TYR-330  27.7 22.0 54.1 -8.3 40.0 30.4 219.7
 TYR-330   GLU-331  25.8 23.0 50.6 -5.0 33.3 75.6 152.3
 GLU-331   GLU-332  26.8 25.5 -62.1 67.3 139.7 122.1 2.2
 GLU-332   GLU-333  26.3 24.7 -28.6 26.3 145.2 152.7 32.8
 GLU-333   GLU-334  25.2 24.9 17.6 1.2 42.0 76.4 50.3
 GLU-334   ILE-335  25.5 24.4 -1.8 36.5 116.1 127.5 122.0
 ILE-335   ARG-336  22.9 21.8 -14.4 24.6 159.4 149.1 79.1
 ARG-336   VAL-337  23.9 23.6 55.7 -51.3 52.1 50.8 -32.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees