Cre Recombinase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-123
ASN-124
22.1
22.0
-4.7
4.3
80.1
81.0
-171.2
ASN-124
VAL-125
18.6
18.4
-2.9
4.3
15.6
15.6
-12.6
VAL-125
ASP-126
18.0
17.9
0.7
9.3
117.7
111.3
-126.5
ASP-126
ALA-127
21.4
21.3
-19.2
25.5
103.6
101.1
88.8
ALA-127
GLY-128
20.8
20.2
-21.8
16.5
64.1
54.3
73.4
GLY-128
GLU-129
17.9
17.5
-9.6
9.2
118.9
112.2
-57.0
GLU-129
ARG-130
14.8
14.4
-8.0
7.4
48.1
43.4
33.3
ARG-130
ALA-131
11.5
11.3
4.8
-8.8
68.3
69.5
50.0
ALA-131
LYS-132
7.9
7.8
-15.8
5.8
64.0
61.8
161.4
LYS-132
GLN-133
5.8
5.7
-4.4
11.0
75.4
81.6
-43.6
GLN-133
ALA-134
2.8
2.9
9.2
-2.3
94.7
90.6
36.1
ALA-134
LEU-135
4.7
5.0
5.8
-2.5
138.8
138.4
-28.5
LEU-135
ALA-136
8.1
8.2
16.9
-10.6
124.4
127.7
-91.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees