Transducin (Alpha Subunit)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-167   GLN-168  4.5 4.7 6.6 0.4 102.0 102.6 17.3
 GLN-168   ASP-169  3.5 3.5 -0.1 -1.4 57.1 58.4 16.1
 ASP-169   VAL-170  1.1 1.1 4.9 -4.9 51.8 51.0 -0.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-186   PHE-187  4.7 5.0 5.5 -7.2 70.5 71.2 -27.3
 PHE-187   LYS-188  5.1 5.7 11.3 -8.8 140.2 145.0 -27.9
 LYS-188   ASP-189  7.5 7.8 2.0 -8.5 149.5 145.9 50.8
 ASP-189   LEU-190  6.0 6.5 16.6 -12.5 79.9 80.6 -8.5
 ASP-189   LEU-190  6.0 6.5 16.6 -12.5 79.9 80.6 -8.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-189   LEU-190  6.0 6.5 16.6 -12.5 79.9 80.6 -8.5
 ASP-189   LEU-190  6.0 6.5 16.6 -12.5 79.9 80.6 -8.5
 LEU-190   ASN-191  2.4 2.8 3.0 2.0 128.6 127.2 -51.1
 ASN-191   PHE-192  2.5 2.7 3.7 -10.9 115.3 117.0 58.4
 PHE-192   ARG-193  2.1 1.9 -6.6 4.4 72.7 69.1 8.5
 ARG-193   MET-194  5.8 5.6 5.8 -4.9 124.4 121.2 1.8
 MET-194   PHE-195  6.2 6.0 7.1 -18.4 122.3 124.9 -10.5
 PHE-195   ASP-196  9.7 9.4 7.7 4.7 141.7 125.3 -40.7
 ASP-196   VAL-197  10.5 10.6 -10.9 13.6 76.8 87.3 -11.7
 VAL-197   GLY-198  14.1 14.4 -22.6 -37.6 37.2 59.2 399.9
 GLY-198   GLY-199  16.0 17.0 18.9 18.6 70.5 65.5 137.8
 GLY-199   GLN-200  17.6 20.7 -6.0 -4.7 55.7 56.5 28.0
 GLN-200   ARG-201  20.3 22.2 -2.5 -6.6 124.2 111.3 -58.6
 ARG-201   SER-202  23.9 24.5 17.7 -0.7 67.3 92.9 27.0
 SER-202   GLU-203  24.5 22.5 7.1 -4.0 51.6 45.8 55.2
 GLU-203   ARG-204  21.2 19.9 6.5 33.4 28.9 26.2 303.5
 ARG-204   LYS-205  21.9 22.6 -9.2 -16.4 134.2 130.2 -134.5
 LYS-205   LYS-206  24.7 21.7 16.8 7.3 40.6 55.7 144.1
 LYS-206   TRP-207  22.4 18.3 -16.1 -26.6 124.3 140.7 -215.5
 TRP-207   ILE-208  20.0 20.2 30.0 -11.4 7.7 34.0 174.2
 ILE-208   HIS-209  21.9 21.5 -0.7 -67.3 125.3 137.4 -421.3
 HIS-209   CYS-210  20.7 18.1 -13.1 57.9 100.2 79.3 -89.1
 CYS-210   PHE-211  17.1 15.5 -26.9 -13.0 123.4 121.8 -229.7
 PHE-211   GLU-212  17.4 16.5 2.7 -5.7 18.1 9.4 -39.4
 GLU-212   GLY-213  16.3 15.7 26.6 -25.9 74.4 77.2 43.2
 GLY-213   VAL-214  13.1 12.6 2.5 6.5 130.1 131.2 -71.1
 VAL-214   THR-215  12.0 11.5 17.2 -15.7 69.4 63.6 5.1
 THR-215   CYS-216  9.6 9.2 3.3 2.0 132.4 125.8 -1.8
 CYS-216   ILE-217  10.6 10.3 -6.0 10.0 28.3 32.5 -34.0
 ILE-217   ILE-218  12.4 12.4 -7.0 3.3 52.1 49.9 13.4
 ILE-218   PHE-219  12.0 11.9 0.8 -1.1 130.1 131.7 9.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees