Elongation Factor 1-Alpha

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-88   ILE-89  19.6 16.9 -13.3 -30.4 34.9 49.7 46.1
 ILE-89   ILE-90  21.0 18.8 18.4 -15.8 131.2 151.3 2.0
 ILE-90   ASP-91  19.0 18.5 154.0 77.4 162.6 126.1 121.3
 ASP-91   ALA-92  20.0 21.4 -57.1 62.6 78.7 14.9 -7.7
 ALA-92   PRO-93  21.6 20.1 3.0 -11.7 175.1 133.7 14.1
 PRO-93   GLY-94  21.8 21.9 -18.6 156.9 108.9 108.6 66.7
 PRO-93   GLY-94  21.8 21.9 -18.6 156.9 108.9 108.6 66.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-93   GLY-94  21.8 21.9 -18.6 156.9 108.9 108.6 66.7
 PRO-93   GLY-94  21.8 21.9 -18.6 156.9 108.9 108.6 66.7
 GLY-94   HIS-95  24.5 22.8 -52.3 93.7 99.3 177.9 45.1
 HIS-95   ARG-96  23.7 23.5 -14.0 -29.9 120.8 117.3 -45.4
 ARG-96   ASP-97  22.0 20.9 30.7 23.3 112.6 67.3 10.7
 ASP-97   PHE-98  19.3 20.5 -25.9 -71.8 53.2 48.4 90.3
 PHE-98   ILE-99  18.5 19.3 101.1 -18.4 83.4 127.0 -0.2
 ILE-99   LYS-100  15.3 16.8 26.8 0.5 94.1 99.3 3.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-103   THR-104  9.9 12.2 6.9 -1.2 69.5 51.5 -3.5
 THR-104   GLY-105  10.6 12.0 -12.6 -130.9 173.2 159.4 242.7
 GLY-105   THR-106  10.6 13.8 -68.4 0.2 119.0 111.9 -41.8
 THR-106   SER-107  14.1 11.7 5.6 21.6 51.5 74.0 -9.7
 SER-107   GLN-108  14.8 8.3 -132.0 30.7 100.1 152.5 -52.5
 GLN-108   ALA-109  11.8 9.9 -155.7 32.8 137.5 139.4 -122.8
 ALA-109   ASP-110  12.7 10.9 5.0 -8.7 55.2 56.9 -11.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-237   PRO-238  8.6 8.5 -23.5 -39.3 52.4 70.4 37.3
 ARG-240   PRO-241  1.3 1.6 -13.1 6.7 60.2 74.2 30.1
 PRO-241   THR-242  2.2 3.6 93.5 -14.0 73.1 79.8 -5.9
 THR-242   ASP-243  5.2 6.7 -171.8 133.6 95.5 78.5 18.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees