Glutamate Receptor Subunit 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-108   LEU-109  8.0 8.2 -21.7 13.5 73.2 72.5 115.1
 LEU-109   GLY-110  4.3 4.4 6.5 14.5 32.8 37.2 263.9
 GLY-110   ILE-111  1.2 1.2 14.7 -18.5 106.9 110.7 -32.0
 ILE-111   SER-112  2.6 2.6 -2.8 7.6 67.7 66.9 -7.2
 SER-112   ILE-113  4.7 4.8 1.8 3.2 108.3 108.8 -58.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-217   LYS-218  4.3 3.7 13.0 -16.7 92.6 101.1 -16.6
 LYS-218   GLY-219  6.1 6.1 6.6 14.3 45.3 38.2 255.2
 GLY-219   TYR-220  9.1 9.0 7.0 0.9 71.8 69.0 -106.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees